Viral Minion DB: a database of viral profile HMMs

Email: argruber@usp.br Phone: +55 (11) 3091-7274

Search HMMs

Search your profile HMMs of interest using taxonomic names or numerical IDs. You can also use the optional filters. Empty fields will not be considered in the query.

Taxonomic name or taxon ID (from NCBI):

Query terms (separated by semicolons):

Excluding query terms (separated by semicolons):

Minimum # of sequences (default >= 1):

Model type:

Minimum length (e.g. 20):

Maximum length (e.g. 60):

Taxonomic range of the models:

Host:

Download all profile HMMs

Download eukaryotic profile HMMs

Download prokaryotic profile HMMs